- save() (Pedigree method)
- (Population method)
- saveConfig() (simuOpt.Params method)
- saveCSV() (in module simuPOP.utils)
- saveFigure() (in module simuPOP.plotter)
- SavePopulation (built-in class)
- SavePopulation() (SavePopulation method)
- ScatterPlotter (class in simuPOP.plotter)
- ScatterPlotter() (simuPOP.plotter.ScatterPlotter method)
- seed() (RNG method)
- selection
- SelfingGenoTransmitter (built-in class)
- SelfingGenoTransmitter() (SelfingGenoTransmitter method)
- SelfMating (built-in class)
- SelfMating() (SelfMating method)
- SequentialParentChooser (built-in class)
- SequentialParentChooser() (SequentialParentChooser method)
- SequentialParentsChooser (built-in class)
- SequentialParentsChooser() (SequentialParentsChooser method)
- set() (RNG method)
- setAffected() (Individual method)
- setAllele() (Individual method)
- setAlleleLineage() (Individual method)
- setAncestralDepth() (Population method)
- setGenotype() (Individual method)
- (Population method)
- setIndInfo() (Population method)
- setInfo() (Individual method)
- setInfoFields() (Population method)
- setLineage() (Individual method)
- (Population method)
- setOptions() (built-in function)
- (in module simuOpt)
- setRNG
- setRNG() (built-in function)
- setSex() (Individual method)
- setSubPopByIndInfo() (Population method)
- setSubPopName() (Population method)
- setVirtualSplitter() (Population method)
- sex() (Individual method)
- SexSplitter (built-in class)
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- SexSplitter() (SexSplitter method)
- simuBackward() (simuPOP.utils.TrajectorySimulator method)
- simuForward() (simuPOP.utils.TrajectorySimulator method)
- simulateBackwardTrajectory() (in module simuPOP.utils)
- simulateForwardTrajectory() (in module simuPOP.utils)
- Simulator
- (built-in class)
- Simulator() (Simulator method)
- simuOpt (module)
- simuPOP.gsl (module)
- simuPOP.plotter (module)
- simuPOP.sampling (module)
- simuPOP.utils (module)
- snpMutate() (built-in function)
- SNPMutator (built-in class)
- SNPMutator() (SNPMutator method)
- sortIndividuals() (Population method)
- splitSubPop() (Population method)
- SplitSubPops
- (built-in class)
- splitSubPops() (built-in function)
- SplitSubPops() (SplitSubPops method)
- Stat (built-in class)
- stat() (built-in function)
- Stat() (Stat method)
- stepwiseMutate() (built-in function)
- StepwiseMutator (built-in class)
- StepwiseMutator() (StepwiseMutator method)
- subPopBegin() (Population method)
- subPopByName() (Population method)
- subPopEnd() (Population method)
- subPopIndPair() (Population method)
- subPopName() (Population method)
- subPopNames() (Population method)
- subPopSize() (Population method)
- subPopSizes() (Population method)
- SummaryTagger (built-in class)
- SummaryTagger() (SummaryTagger method)
- swap() (Population method)
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