- absIndIndex() (Population method)
- absLocusIndex() (GenoStruTrait method)
- acgtMutate() (built-in function)
- AcgtMutator (built-in class)
- AcgtMutator() (AcgtMutator method)
- add() (Simulator method)
- addChrom() (Population method)
- addChromFrom() (Population method)
- addIndFrom() (Population method)
- addInfoFields() (Population method)
- addLoci() (Population method)
- addLociFrom() (Population method)
- addOption() (simuOpt.Params method)
- affected() (Individual method)
- AffectedSibpairSampler (class in simuPOP.sampling)
- AffectedSibpairSampler() (simuPOP.sampling.AffectedSibpairSampler method)
- AffectionSplitter (built-in class)
- AffectionSplitter() (AffectionSplitter method)
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- allele() (Individual method)
- alleleChar() (Individual method)
- alleleLineage() (Individual method)
- alleleName() (GenoStruTrait method)
- alleleNames() (GenoStruTrait method)
- allIndividuals() (Population method)
- ancestor() (Population method)
- ancestralGens() (Population method)
- apply() (BaseOperator method)
- (BasePenetrance method)
- (BaseQuanTrait method)
- applyToIndividual() (BasePenetrance method)
- asDict() (simuOpt.Params method)
- asList() (simuOpt.Params method)
- asPedigree() (Population method)
- asPopulation() (Pedigree method)
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