HapMap
- loadHapMap_r22 This script downloads and saves the release 22 of the HapMap dataset by population and chromosome.
- HapMapUtil This module provides functions to merge HapMap populations using overlapping markers, and to select markers according to criteria such as ranges on chromosomes, minor allele frequency and minimal distance between adjacent markers. The module itself can be used as a script to create a population with selected markers in selected populations.
LINKAGE
- LinkageUtil This script allows you to export your simulated populations into LINKAGE format.
FSTAT
- FstatUtil This script allows you to export the simulated population into a FSTAT readable file format.
SOLAR
- SolarUtil This script exports your simulated population into a frequency file in the SOLAR readable format.
MERLIN
- MerlinUtil This script exports your simulated populations into MERLIN input files in QTDT format.
POPGENE
- PopgeneUtil This script exports your simulated populations into a POPGENE data file.
